Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sgms1Q8VCQ6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgms1Q8VCQ6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Mir6404-201ENSMUST00000183699 94 ntBASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgms1Q8VCQ6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Gm11950-201ENSMUST00000121615 838 ntBASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.4■□□□□ 0.38
Sgms1Q8VCQ6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sgms1Q8VCQ6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sgms1Q8VCQ6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Gm14859-201ENSMUST00000117752 357 ntBASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgms1Q8VCQ6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgms1Q8VCQ6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.38■□□□□ 0.37
Sgms1Q8VCQ6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.38■□□□□ 0.37
Sgms1Q8VCQ6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgms1Q8VCQ6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgms1Q8VCQ6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms