Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Mir1668-201ENSMUST00000184114 107 ntBASIC15.58■□□□□ 0.08
Rnf8Q8VC56 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf8Q8VC56 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Gm7977-201ENSMUST00000193787 748 ntBASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Gm7370-201ENSMUST00000219471 767 ntBASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Gm18032-201ENSMUST00000222541 538 ntBASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf8Q8VC56 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf8Q8VC56 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Gm27389-201ENSMUST00000183622 195 ntBASIC15.55■□□□□ 0.08
Rnf8Q8VC56 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf8Q8VC56 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf8Q8VC56 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms