Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm38188-201ENSMUST00000192879 856 ntBASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Gm18660-201ENSMUST00000199542 629 ntBASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacnb1Q8R3Z5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Gm19080-201ENSMUST00000196082 550 ntBASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cacnb1Q8R3Z5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cacnb1Q8R3Z5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Gm6649-201ENSMUST00000199743 1165 ntBASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 AC154683.1-201ENSMUST00000228409 1284 ntBASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacnb1Q8R3Z5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacnb1Q8R3Z5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms