Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zcchc9Q8R1J3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zcchc9Q8R1J3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Gm37935-201ENSMUST00000192012 982 ntBASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zcchc9Q8R1J3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zcchc9Q8R1J3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms