Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alms1Q8K4E0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.73■□□□□ 0.11
Alms1Q8K4E0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alms1Q8K4E0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Gm12497-201ENSMUST00000138778 237 ntBASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.72■□□□□ 0.11
Alms1Q8K4E0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Alms1Q8K4E0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Alms1Q8K4E0 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Alms1Q8K4E0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Alms1Q8K4E0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Alms1Q8K4E0 Mir6956-201ENSMUST00000183598 62 ntBASIC15.69■□□□□ 0.1
Alms1Q8K4E0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Alms1Q8K4E0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Alms1Q8K4E0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms