Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Clrn1Q8K445 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Gm44430-201ENSMUST00000203376 995 ntBASIC15.22■□□□□ 0.03
Clrn1Q8K445 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Gm45328-201ENSMUST00000210942 917 ntBASIC15.22■□□□□ 0.03
Clrn1Q8K445 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clrn1Q8K445 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Clrn1Q8K445 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms