Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Gm18101-201ENSMUST00000215769 548 ntBASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cchcr1Q8K2I2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cchcr1Q8K2I2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cchcr1Q8K2I2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.08■□□□□ 0.65
Cchcr1Q8K2I2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.08■□□□□ 0.65
Cchcr1Q8K2I2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cchcr1Q8K2I2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Cchcr1Q8K2I2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Gm11355-201ENSMUST00000121120 306 ntBASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Gm22697-201ENSMUST00000175194 63 ntBASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cchcr1Q8K2I2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cchcr1Q8K2I2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cchcr1Q8K2I2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cchcr1Q8K2I2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms