Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfwd3Q8CIK8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd3Q8CIK8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd3Q8CIK8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Gm27704-201ENSMUST00000185094 107 ntBASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd3Q8CIK8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms