Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.82■□□□□ 0.76
Smc4Q8CG47 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.82■□□□□ 0.76
Smc4Q8CG47 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc4Q8CG47 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc4Q8CG47 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.8■□□□□ 0.76
Smc4Q8CG47 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc4Q8CG47 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.79■□□□□ 0.76
Smc4Q8CG47 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc4Q8CG47 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms