Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.97■□□□□ 0.79
Smc5Q8CG46 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.96■□□□□ 0.79
Smc5Q8CG46 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc5Q8CG46 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Gm37055-201ENSMUST00000191866 133 ntBASIC19.95■□□□□ 0.78
Smc5Q8CG46 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc5Q8CG46 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.94■□□□□ 0.78
Smc5Q8CG46 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.94■□□□□ 0.78
Smc5Q8CG46 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smc5Q8CG46 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.93■□□□□ 0.78
Smc5Q8CG46 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.93■□□□□ 0.78
Smc5Q8CG46 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc5Q8CG46 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc5Q8CG46 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.92■□□□□ 0.78
Smc5Q8CG46 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms