Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp1Q8C8C1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp1Q8C8C1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Gm5312-201ENSMUST00000203728 547 ntBASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp1Q8C8C1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Gm17968-201ENSMUST00000194902 784 ntBASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp1Q8C8C1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtp1Q8C8C1 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms