Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Eri3Q8C460 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Eri3Q8C460 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Gm14859-201ENSMUST00000117752 357 ntBASIC15.34■□□□□ 0.05
Eri3Q8C460 Gm15794-201ENSMUST00000120182 631 ntBASIC15.34■□□□□ 0.05
Eri3Q8C460 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Eri3Q8C460 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.34■□□□□ 0.05
Eri3Q8C460 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Eri3Q8C460 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Eri3Q8C460 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.34■□□□□ 0.05
Eri3Q8C460 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Eri3Q8C460 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Eri3Q8C460 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.33■□□□□ 0.05
Eri3Q8C460 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Eri3Q8C460 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Eri3Q8C460 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Eri3Q8C460 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Gm27742-201ENSMUST00000184667 60 ntBASIC15.33■□□□□ 0.04
Eri3Q8C460 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Eri3Q8C460 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Eri3Q8C460 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.33■□□□□ 0.04
Eri3Q8C460 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Eri3Q8C460 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Eri3Q8C460 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Eri3Q8C460 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.32■□□□□ 0.04
Eri3Q8C460 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Eri3Q8C460 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Eri3Q8C460 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Eri3Q8C460 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.31■□□□□ 0.04
Eri3Q8C460 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Eri3Q8C460 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Eri3Q8C460 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Eri3Q8C460 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Eri3Q8C460 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms