Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tsen54Q8C2A2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tsen54Q8C2A2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tsen54Q8C2A2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Gm42545-201ENSMUST00000202755 922 ntBASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tsen54Q8C2A2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.52□□□□□ -0.24
Tsen54Q8C2A2 Gm11643-201ENSMUST00000119578 864 ntBASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Gm43183-201ENSMUST00000200632 547 ntBASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tsen54Q8C2A2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Gm37292-201ENSMUST00000192062 758 ntBASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tsen54Q8C2A2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms