Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp4r4Q8C0Y0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp4r4Q8C0Y0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ppp4r4Q8C0Y0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Gm29707-201ENSMUST00000196325 491 ntBASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp4r4Q8C0Y0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms