Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.26□□□□□ -0.13
SprnQ8BWU1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SprnQ8BWU1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Gm38027-201ENSMUST00000192315 235 ntBASIC14.25□□□□□ -0.13
SprnQ8BWU1 Gm21814-202ENSMUST00000203277 873 ntBASIC14.25□□□□□ -0.13
SprnQ8BWU1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.25□□□□□ -0.13
SprnQ8BWU1 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.25□□□□□ -0.13
SprnQ8BWU1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SprnQ8BWU1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gm30025-201ENSMUST00000218555 728 ntBASIC14.24□□□□□ -0.13
SprnQ8BWU1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SprnQ8BWU1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms