Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Suds3Q8BR65 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Suds3Q8BR65 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Suds3Q8BR65 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Suds3Q8BR65 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Suds3Q8BR65 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Suds3Q8BR65 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.58■□□□□ 0.25
Suds3Q8BR65 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Gm26039-201ENSMUST00000158152 144 ntBASIC16.58■□□□□ 0.24
Suds3Q8BR65 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.58■□□□□ 0.24
Suds3Q8BR65 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Suds3Q8BR65 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.57■□□□□ 0.24
Suds3Q8BR65 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.57■□□□□ 0.24
Suds3Q8BR65 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.57■□□□□ 0.24
Suds3Q8BR65 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Suds3Q8BR65 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.56■□□□□ 0.24
Suds3Q8BR65 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Suds3Q8BR65 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms