Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Depdc1bQ8BH88 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Gm6623-201ENSMUST00000173570 544 ntBASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Depdc1bQ8BH88 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Gm18669-201ENSMUST00000216049 778 ntBASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Depdc1bQ8BH88 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Gm17971-201ENSMUST00000190239 806 ntBASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Depdc1bQ8BH88 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Depdc1bQ8BH88 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Depdc1bQ8BH88 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Mir770-201ENSMUST00000103252 94 ntBASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Gm29707-201ENSMUST00000196325 491 ntBASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Depdc1bQ8BH88 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms