Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.54■□□□□ 0.08
Trim23Q8BGX0 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim23Q8BGX0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim23Q8BGX0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.52■□□□□ 0.08
Trim23Q8BGX0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim23Q8BGX0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim23Q8BGX0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim23Q8BGX0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms