Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.3■□□□□ 0.36
Trim65Q8BFW4 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim65Q8BFW4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim65Q8BFW4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim65Q8BFW4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.27■□□□□ 0.36
Trim65Q8BFW4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim65Q8BFW4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim65Q8BFW4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim65Q8BFW4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms