Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sox21Q811W0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sox21Q811W0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox21Q811W0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox21Q811W0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox21Q811W0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox21Q811W0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.19□□□□□ -0.3
Sox21Q811W0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox21Q811W0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.18□□□□□ -0.3
Sox21Q811W0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox21Q811W0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox21Q811W0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.17□□□□□ -0.3
Sox21Q811W0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Mir8098-201ENSMUST00000184011 137 ntBASIC13.17□□□□□ -0.3
Sox21Q811W0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.17□□□□□ -0.3
Sox21Q811W0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox21Q811W0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox21Q811W0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox21Q811W0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Gm12644-201ENSMUST00000119935 606 ntBASIC13.16□□□□□ -0.3
Sox21Q811W0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.16□□□□□ -0.3
Sox21Q811W0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox21Q811W0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms