Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Ubp1Q811S7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubp1Q811S7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ubp1Q811S7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubp1Q811S7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubp1Q811S7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Ubp1Q811S7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.89■□□□□ 0.13
Ubp1Q811S7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubp1Q811S7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
Ubp1Q811S7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubp1Q811S7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.86■□□□□ 0.13
Ubp1Q811S7 Ank2-226ENSMUST00000189368 339 ntBASIC15.86■□□□□ 0.13
Ubp1Q811S7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubp1Q811S7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms