Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.43■□□□□ 0.22
Ddx42Q810A7 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.43■□□□□ 0.22
Ddx42Q810A7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx42Q810A7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gm6659-201ENSMUST00000174752 547 ntBASIC16.42■□□□□ 0.22
Ddx42Q810A7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gm21362-201ENSMUST00000194272 928 ntBASIC16.42■□□□□ 0.22
Ddx42Q810A7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx42Q810A7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Gm4974-201ENSMUST00000209974 875 ntBASIC16.41■□□□□ 0.22
Ddx42Q810A7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx42Q810A7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.4■□□□□ 0.22
Ddx42Q810A7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.4■□□□□ 0.22
Ddx42Q810A7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx42Q810A7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms