Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm11764-201ENSMUST00000120221 623 ntBASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Gm14822-201ENSMUST00000122247 291 ntBASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Gm5682-201ENSMUST00000173402 505 ntBASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp6nlQ80XC3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp6nlQ80XC3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp6nlQ80XC3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.72■□□□□ 0.43
Usp6nlQ80XC3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.71■□□□□ 0.43
Usp6nlQ80XC3 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms