Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 AC151836.1-202ENSMUST00000226259 753 ntBASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Nrn1-204ENSMUST00000224323 1779 ntBASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ShprhQ7TPQ3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Mir6990-201ENSMUST00000183724 91 ntBASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC22.68■■□□□ 1.22
ShprhQ7TPQ3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Gm44872-201ENSMUST00000207864 420 ntBASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 AC139382.1-201ENSMUST00000221402 498 ntBASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ShprhQ7TPQ3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Gm5898-201ENSMUST00000121016 2071 ntBASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Rpph1-201ENSMUST00000175096 319 ntBASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Gm20553-201ENSMUST00000204205 844 ntBASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ShprhQ7TPQ3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Gm27301-201ENSMUST00000184012 127 ntBASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Gm13365-201ENSMUST00000121188 973 ntBASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShprhQ7TPQ3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ShprhQ7TPQ3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC22.64■■□□□ 1.22
ShprhQ7TPQ3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ShprhQ7TPQ3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ShprhQ7TPQ3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ShprhQ7TPQ3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ShprhQ7TPQ3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
ShprhQ7TPQ3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ShprhQ7TPQ3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC22.64■■□□□ 1.21
ShprhQ7TPQ3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ShprhQ7TPQ3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ShprhQ7TPQ3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Gm6226-201ENSMUST00000117765 1146 ntBASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Gm43474-201ENSMUST00000196415 774 ntBASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ShprhQ7TPQ3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ShprhQ7TPQ3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ShprhQ7TPQ3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ShprhQ7TPQ3 Gm12008-201ENSMUST00000117791 755 ntBASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms