Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.71■□□□□ 0.27
Cspg5Q71M36 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cspg5Q71M36 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.7■□□□□ 0.26
Cspg5Q71M36 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Gm6296-201ENSMUST00000222599 943 ntBASIC16.7■□□□□ 0.26
Cspg5Q71M36 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg5Q71M36 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.69■□□□□ 0.26
Cspg5Q71M36 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm8000-201ENSMUST00000188378 592 ntBASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.69■□□□□ 0.26
Cspg5Q71M36 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.69■□□□□ 0.26
Cspg5Q71M36 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.69■□□□□ 0.26
Cspg5Q71M36 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.68■□□□□ 0.26
Cspg5Q71M36 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Gm15165-201ENSMUST00000118140 502 ntBASIC16.68■□□□□ 0.26
Cspg5Q71M36 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg5Q71M36 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Gm1401-201ENSMUST00000122048 772 ntBASIC16.67■□□□□ 0.26
Cspg5Q71M36 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.67■□□□□ 0.26
Cspg5Q71M36 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cspg5Q71M36 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.67■□□□□ 0.26
Cspg5Q71M36 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg5Q71M36 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms