Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Gm5874-201ENSMUST00000096101 508 ntBASIC15.68■□□□□ 0.1
RfflQ6ZQM0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RfflQ6ZQM0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Gm10849-201ENSMUST00000100397 618 ntBASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Mir5133-201ENSMUST00000174955 77 ntBASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RfflQ6ZQM0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RfflQ6ZQM0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm12896-201ENSMUST00000118430 226 ntBASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm18958-201ENSMUST00000174258 762 ntBASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RfflQ6ZQM0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RfflQ6ZQM0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RfflQ6ZQM0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms