Protein–RNA interactions for Protein: Q6PIC6

Atp1a3, Sodium/potassium-transporting ATPase subunit alpha-3, mousemouse

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a3Q6PIC6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp1a3Q6PIC6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp1a3Q6PIC6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp1a3Q6PIC6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp1a3Q6PIC6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atp1a3Q6PIC6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Atp1a3Q6PIC6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Atp1a3Q6PIC6 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp1a3Q6PIC6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Gm37722-201ENSMUST00000193757 208 ntBASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Gm10252-201ENSMUST00000209541 832 ntBASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp1a3Q6PIC6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Atp1a3Q6PIC6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp1a3Q6PIC6 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.29■□□□□ 0.52
Atp1a3Q6PIC6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp1a3Q6PIC6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp1a3Q6PIC6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp1a3Q6PIC6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms