Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Snx13Q6PHS6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snx13Q6PHS6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snx13Q6PHS6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Snx13Q6PHS6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx13Q6PHS6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Snx13Q6PHS6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Snx13Q6PHS6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx13Q6PHS6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms