Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Gm37153-201ENSMUST00000193637 231 ntBASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Snrnp40Q6PE01 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Gm4899-201ENSMUST00000178708 719 ntBASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snrnp40Q6PE01 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snrnp40Q6PE01 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms