Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Gm15375-201ENSMUST00000119510 849 ntBASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf220Q6PDX6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rnf220Q6PDX6 App-207ENSMUST00000227737 2827 ntBASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf220Q6PDX6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf220Q6PDX6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms