Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rtl3Q6P1Y1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rtl3Q6P1Y1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl3Q6P1Y1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Rprl3-201ENSMUST00000157400 290 ntBASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rtl3Q6P1Y1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Gm27459-201ENSMUST00000184860 107 ntBASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl3Q6P1Y1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Gm28659-201ENSMUST00000188013 759 ntBASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl3Q6P1Y1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms