Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac4Q6NZM9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac4Q6NZM9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Gm15794-201ENSMUST00000120182 631 ntBASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac4Q6NZM9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Hdac4Q6NZM9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac4Q6NZM9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac4Q6NZM9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.02■□□□□ 0.47
Hdac4Q6NZM9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.02■□□□□ 0.47
Hdac4Q6NZM9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Hdac4Q6NZM9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac4Q6NZM9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac4Q6NZM9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms