Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpsf6Q6NVF9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf6Q6NVF9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Gm11355-201ENSMUST00000121120 306 ntBASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Gm18032-201ENSMUST00000222541 538 ntBASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf6Q6NVF9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf6Q6NVF9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf6Q6NVF9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms