Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg2Q6NS82 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retreg2Q6NS82 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retreg2Q6NS82 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.35■□□□□ 0.37
Retreg2Q6NS82 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retreg2Q6NS82 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.34■□□□□ 0.37
Retreg2Q6NS82 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.34■□□□□ 0.37
Retreg2Q6NS82 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg2Q6NS82 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg2Q6NS82 Gm45328-201ENSMUST00000210942 917 ntBASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg2Q6NS82 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retreg2Q6NS82 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms