Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col11a2Q64739 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col11a2Q64739 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Gm9385-201ENSMUST00000117563 472 ntBASIC19.42■□□□□ 0.7
Col11a2Q64739 Gm13223-201ENSMUST00000118609 747 ntBASIC19.42■□□□□ 0.7
Col11a2Q64739 Gm5745-201ENSMUST00000183748 313 ntBASIC19.42■□□□□ 0.7
Col11a2Q64739 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.42■□□□□ 0.7
Col11a2Q64739 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.42■□□□□ 0.7
Col11a2Q64739 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col11a2Q64739 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col11a2Q64739 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col11a2Q64739 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Col11a2Q64739 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col11a2Q64739 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.41■□□□□ 0.7
Col11a2Q64739 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.41■□□□□ 0.7
Col11a2Q64739 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.41■□□□□ 0.7
Col11a2Q64739 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col11a2Q64739 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col11a2Q64739 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.4■□□□□ 0.7
Col11a2Q64739 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.4■□□□□ 0.7
Col11a2Q64739 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.4■□□□□ 0.7
Col11a2Q64739 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col11a2Q64739 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.39■□□□□ 0.7
Col11a2Q64739 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col11a2Q64739 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Gm38294-201ENSMUST00000192831 381 ntBASIC19.39■□□□□ 0.7
Col11a2Q64739 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col11a2Q64739 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col11a2Q64739 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.39■□□□□ 0.7
Col11a2Q64739 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col11a2Q64739 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col11a2Q64739 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col11a2Q64739 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col11a2Q64739 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.39■□□□□ 0.69
Col11a2Q64739 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col11a2Q64739 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.39■□□□□ 0.69
Col11a2Q64739 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.39■□□□□ 0.69
Col11a2Q64739 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.39■□□□□ 0.69
Col11a2Q64739 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col11a2Q64739 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col11a2Q64739 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col11a2Q64739 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Gm5866-201ENSMUST00000177881 973 ntBASIC19.38■□□□□ 0.69
Col11a2Q64739 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.38■□□□□ 0.69
Col11a2Q64739 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms