Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn1Q64347 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Clcn1Q64347 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.35■□□□□ 0.85
Clcn1Q64347 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.35■□□□□ 0.85
Clcn1Q64347 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.35■□□□□ 0.85
Clcn1Q64347 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.35■□□□□ 0.85
Clcn1Q64347 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.35■□□□□ 0.85
Clcn1Q64347 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Clcn1Q64347 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn1Q64347 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Clcn1Q64347 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.34■□□□□ 0.85
Clcn1Q64347 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Clcn1Q64347 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.34■□□□□ 0.85
Clcn1Q64347 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.34■□□□□ 0.85
Clcn1Q64347 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Clcn1Q64347 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Clcn1Q64347 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn1Q64347 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.33■□□□□ 0.85
Clcn1Q64347 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Clcn1Q64347 Gm25406-201ENSMUST00000157599 105 ntBASIC20.33■□□□□ 0.85
Clcn1Q64347 Gm25911-201ENSMUST00000157621 56 ntBASIC20.33■□□□□ 0.85
Clcn1Q64347 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.33■□□□□ 0.85
Clcn1Q64347 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Clcn1Q64347 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.33■□□□□ 0.85
Clcn1Q64347 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn1Q64347 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn1Q64347 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn1Q64347 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Clcn1Q64347 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn1Q64347 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.32■□□□□ 0.84
Clcn1Q64347 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.32■□□□□ 0.84
Clcn1Q64347 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Clcn1Q64347 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.32■□□□□ 0.84
Clcn1Q64347 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.32■□□□□ 0.84
Clcn1Q64347 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.32■□□□□ 0.84
Clcn1Q64347 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.32■□□□□ 0.84
Clcn1Q64347 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.32■□□□□ 0.84
Clcn1Q64347 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.32■□□□□ 0.84
Clcn1Q64347 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn1Q64347 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Clcn1Q64347 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn1Q64347 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn1Q64347 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn1Q64347 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn1Q64347 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn1Q64347 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.31■□□□□ 0.84
Clcn1Q64347 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn1Q64347 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Clcn1Q64347 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms