Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Mir1247-201ENSMUST00000116706 82 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm2810-201ENSMUST00000118681 990 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm16198-201ENSMUST00000118766 670 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm18489-201ENSMUST00000172565 551 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col7a1Q63870 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col7a1Q63870 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Gm15824-201ENSMUST00000119516 955 ntBASIC13.28□□□□□ -0.28
Col7a1Q63870 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col7a1Q63870 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.28□□□□□ -0.28
Col7a1Q63870 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col7a1Q63870 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col7a1Q63870 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col7a1Q63870 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col7a1Q63870 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.27□□□□□ -0.28
Col7a1Q63870 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.27□□□□□ -0.28
Col7a1Q63870 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col7a1Q63870 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Col7a1Q63870 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.27□□□□□ -0.28
Col7a1Q63870 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.28
Col7a1Q63870 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Col7a1Q63870 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.27□□□□□ -0.28
Col7a1Q63870 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.27□□□□□ -0.28
Col7a1Q63870 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col7a1Q63870 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Col7a1Q63870 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col7a1Q63870 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col7a1Q63870 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col7a1Q63870 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col7a1Q63870 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col7a1Q63870 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.27□□□□□ -0.29
Col7a1Q63870 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.27□□□□□ -0.29
Col7a1Q63870 Gm6218-201ENSMUST00000219812 628 ntBASIC13.27□□□□□ -0.29
Col7a1Q63870 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.27□□□□□ -0.29
Col7a1Q63870 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col7a1Q63870 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.27□□□□□ -0.29
Col7a1Q63870 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.26□□□□□ -0.29
Col7a1Q63870 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gm28630-201ENSMUST00000187806 498 ntBASIC13.26□□□□□ -0.29
Col7a1Q63870 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col7a1Q63870 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.26□□□□□ -0.29
Col7a1Q63870 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col7a1Q63870 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col7a1Q63870 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col7a1Q63870 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col7a1Q63870 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms