Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox19Q62249 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox19Q62249 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox19Q62249 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox19Q62249 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox19Q62249 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.8□□□□□ -0.2
Sox19Q62249 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.8□□□□□ -0.2
Sox19Q62249 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox19Q62249 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.8□□□□□ -0.2
Sox19Q62249 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox19Q62249 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.8□□□□□ -0.2
Sox19Q62249 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.8□□□□□ -0.2
Sox19Q62249 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox19Q62249 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox19Q62249 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox19Q62249 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Sox19Q62249 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox19Q62249 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sox19Q62249 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox19Q62249 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Sybu-209ENSMUST00000228639 4113 ntBASIC13.78□□□□□ -0.2
Sox19Q62249 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox19Q62249 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox19Q62249 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox19Q62249 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sox19Q62249 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox19Q62249 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox19Q62249 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox19Q62249 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox19Q62249 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox19Q62249 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox19Q62249 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox19Q62249 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Gm27275-201ENSMUST00000184318 272 ntBASIC13.77□□□□□ -0.21
Sox19Q62249 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox19Q62249 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms