Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six2Q62232 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Six2Q62232 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.19■□□□□ 0.34
Six2Q62232 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.19■□□□□ 0.34
Six2Q62232 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Six2Q62232 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Prob1-201ENSMUST00000097619 3021 ntBASIC17.19■□□□□ 0.34
Six2Q62232 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six2Q62232 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Gm13836-201ENSMUST00000121159 501 ntBASIC17.18■□□□□ 0.34
Six2Q62232 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.18■□□□□ 0.34
Six2Q62232 Mir6404-201ENSMUST00000183699 94 ntBASIC17.18■□□□□ 0.34
Six2Q62232 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Six2Q62232 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.18■□□□□ 0.34
Six2Q62232 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six2Q62232 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Six2Q62232 App-207ENSMUST00000227737 2827 ntBASIC17.17■□□□□ 0.34
Six2Q62232 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.17■□□□□ 0.34
Six2Q62232 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.17■□□□□ 0.34
Six2Q62232 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.17■□□□□ 0.34
Six2Q62232 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six2Q62232 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 AA414768-201ENSMUST00000121924 1257 ntBASIC17.16■□□□□ 0.34
Six2Q62232 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Gm25016-201ENSMUST00000158399 131 ntBASIC17.16■□□□□ 0.34
Six2Q62232 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Gm45328-201ENSMUST00000210942 917 ntBASIC17.16■□□□□ 0.34
Six2Q62232 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
Six2Q62232 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Six2Q62232 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms