Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.95■□□□□ 0.62
Ctr9Q62018 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ctr9Q62018 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ctr9Q62018 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Gm11452-201ENSMUST00000122376 690 ntBASIC18.95■□□□□ 0.62
Ctr9Q62018 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Mir8098-201ENSMUST00000184011 137 ntBASIC18.95■□□□□ 0.62
Ctr9Q62018 Gm7506-201ENSMUST00000207758 815 ntBASIC18.95■□□□□ 0.62
Ctr9Q62018 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.95■□□□□ 0.62
Ctr9Q62018 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ctr9Q62018 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ctr9Q62018 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ctr9Q62018 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ctr9Q62018 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44357-201ENSMUST00000195897 142 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm19658-201ENSMUST00000196231 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44367-201ENSMUST00000196836 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44350-201ENSMUST00000197197 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44390-201ENSMUST00000197533 144 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44313-201ENSMUST00000198018 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44486-201ENSMUST00000198508 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44314-201ENSMUST00000199263 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44394-201ENSMUST00000199558 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44484-201ENSMUST00000199873 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44466-201ENSMUST00000200264 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm44359-201ENSMUST00000200671 138 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.94■□□□□ 0.62
Ctr9Q62018 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.94■□□□□ 0.62
Ctr9Q62018 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ctr9Q62018 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ctr9Q62018 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctr9Q62018 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.93■□□□□ 0.62
Ctr9Q62018 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ctr9Q62018 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.93■□□□□ 0.62
Ctr9Q62018 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Ctr9Q62018 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.93■□□□□ 0.62
Ctr9Q62018 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.93■□□□□ 0.62
Ctr9Q62018 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.93■□□□□ 0.62
Ctr9Q62018 Mir6404-201ENSMUST00000183699 94 ntBASIC18.93■□□□□ 0.62
Ctr9Q62018 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Gm6296-201ENSMUST00000222599 943 ntBASIC18.93■□□□□ 0.62
Ctr9Q62018 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ctr9Q62018 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Ctr9Q62018 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ctr9Q62018 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ctr9Q62018 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ctr9Q62018 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.92■□□□□ 0.62
Ctr9Q62018 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.92■□□□□ 0.62
Ctr9Q62018 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms