Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.45■□□□□ 0.06
Rai1Q61818 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.45■□□□□ 0.06
Rai1Q61818 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rai1Q61818 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Gm27494-201ENSMUST00000184735 189 ntBASIC15.45■□□□□ 0.06
Rai1Q61818 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.45■□□□□ 0.06
Rai1Q61818 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rai1Q61818 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.44■□□□□ 0.06
Rai1Q61818 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.44■□□□□ 0.06
Rai1Q61818 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.44■□□□□ 0.06
Rai1Q61818 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Rai1Q61818 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.44■□□□□ 0.06
Rai1Q61818 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rai1Q61818 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rai1Q61818 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rai1Q61818 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rai1Q61818 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Rai1Q61818 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.43■□□□□ 0.06
Rai1Q61818 Gm7787-201ENSMUST00000216858 688 ntBASIC15.43■□□□□ 0.06
Rai1Q61818 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rai1Q61818 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rai1Q61818 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rai1Q61818 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Gm5177-201ENSMUST00000183092 997 ntBASIC15.42■□□□□ 0.06
Rai1Q61818 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.42■□□□□ 0.06
Rai1Q61818 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rai1Q61818 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rai1Q61818 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rai1Q61818 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.42■□□□□ 0.06
Rai1Q61818 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Gm15920-201ENSMUST00000118998 402 ntBASIC15.42■□□□□ 0.06
Rai1Q61818 Gm44492-201ENSMUST00000197012 141 ntBASIC15.42■□□□□ 0.06
Rai1Q61818 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rai1Q61818 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rai1Q61818 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rai1Q61818 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Gm15427-201ENSMUST00000117288 531 ntBASIC15.41■□□□□ 0.06
Rai1Q61818 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.41■□□□□ 0.06
Rai1Q61818 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.41■□□□□ 0.06
Rai1Q61818 Gm43125-201ENSMUST00000201724 730 ntBASIC15.41■□□□□ 0.06
Rai1Q61818 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rai1Q61818 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.41■□□□□ 0.06
Rai1Q61818 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rai1Q61818 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms