Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm27704-201ENSMUST00000185094 107 ntBASIC11.87□□□□□ -0.51
Foxc1Q61572 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.87□□□□□ -0.51
Foxc1Q61572 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Foxc1Q61572 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxc1Q61572 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Foxc1Q61572 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Gm11336-201ENSMUST00000118168 334 ntBASIC11.86□□□□□ -0.51
Foxc1Q61572 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Gm37722-201ENSMUST00000193757 208 ntBASIC11.86□□□□□ -0.51
Foxc1Q61572 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.86□□□□□ -0.51
Foxc1Q61572 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
Foxc1Q61572 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Foxc1Q61572 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Foxc1Q61572 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.86□□□□□ -0.51
Foxc1Q61572 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxc1Q61572 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.85□□□□□ -0.51
Foxc1Q61572 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Gm17807-201ENSMUST00000186869 298 ntBASIC11.85□□□□□ -0.51
Foxc1Q61572 Gm17808-201ENSMUST00000200859 894 ntBASIC11.85□□□□□ -0.51
Foxc1Q61572 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.85□□□□□ -0.51
Foxc1Q61572 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.85□□□□□ -0.51
Foxc1Q61572 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.85□□□□□ -0.51
Foxc1Q61572 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Foxc1Q61572 Phf7-203ENSMUST00000226565 1971 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms