Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm18669-201ENSMUST00000216049 778 ntBASIC16.27■□□□□ 0.2
Six4Q61321 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.27■□□□□ 0.2
Six4Q61321 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six4Q61321 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six4Q61321 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six4Q61321 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six4Q61321 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Six4Q61321 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Six4Q61321 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Six4Q61321 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.26■□□□□ 0.19
Six4Q61321 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Six4Q61321 Rprl3-201ENSMUST00000157400 290 ntBASIC16.26■□□□□ 0.19
Six4Q61321 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Six4Q61321 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Six4Q61321 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Six4Q61321 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.26■□□□□ 0.19
Six4Q61321 Mir6404-201ENSMUST00000183699 94 ntBASIC16.26■□□□□ 0.19
Six4Q61321 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.26■□□□□ 0.19
Six4Q61321 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.26■□□□□ 0.19
Six4Q61321 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Six4Q61321 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.26■□□□□ 0.19
Six4Q61321 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Six4Q61321 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six4Q61321 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.25■□□□□ 0.19
Six4Q61321 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Gm9103-201ENSMUST00000119371 405 ntBASIC16.25■□□□□ 0.19
Six4Q61321 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Six4Q61321 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.25■□□□□ 0.19
Six4Q61321 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.25■□□□□ 0.19
Six4Q61321 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.25■□□□□ 0.19
Six4Q61321 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Six4Q61321 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Six4Q61321 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six4Q61321 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.24■□□□□ 0.19
Six4Q61321 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Gm12895-201ENSMUST00000122214 226 ntBASIC16.24■□□□□ 0.19
Six4Q61321 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.24■□□□□ 0.19
Six4Q61321 Gm27867-201ENSMUST00000184778 125 ntBASIC16.24■□□□□ 0.19
Six4Q61321 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Gm44454-201ENSMUST00000198541 138 ntBASIC16.24■□□□□ 0.19
Six4Q61321 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.24■□□□□ 0.19
Six4Q61321 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.24■□□□□ 0.19
Six4Q61321 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.24■□□□□ 0.19
Six4Q61321 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six4Q61321 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms