Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.48□□□□□ -0.25
Hcfc1Q61191 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Mir6990-201ENSMUST00000183724 91 ntBASIC13.48□□□□□ -0.25
Hcfc1Q61191 Gm45612-201ENSMUST00000211320 160 ntBASIC13.48□□□□□ -0.25
Hcfc1Q61191 Gm8396-201ENSMUST00000057361 823 ntBASIC13.48□□□□□ -0.25
Hcfc1Q61191 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hcfc1Q61191 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.47□□□□□ -0.25
Hcfc1Q61191 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.47□□□□□ -0.25
Hcfc1Q61191 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hcfc1Q61191 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Mir1895-201ENSMUST00000122615 79 ntBASIC13.46□□□□□ -0.25
Hcfc1Q61191 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hcfc1Q61191 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Hcfc1Q61191 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hcfc1Q61191 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.45□□□□□ -0.26
Hcfc1Q61191 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hcfc1Q61191 Gm11745-201ENSMUST00000121669 448 ntBASIC13.45□□□□□ -0.26
Hcfc1Q61191 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms