Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.63■□□□□ 0.41
Cln3Q61124 Gm37153-201ENSMUST00000193637 231 ntBASIC17.63■□□□□ 0.41
Cln3Q61124 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Cln3Q61124 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cln3Q61124 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln3Q61124 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Cln3Q61124 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Gm26308-201ENSMUST00000157768 69 ntBASIC17.62■□□□□ 0.41
Cln3Q61124 Gm37444-201ENSMUST00000193605 439 ntBASIC17.62■□□□□ 0.41
Cln3Q61124 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.62■□□□□ 0.41
Cln3Q61124 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cln3Q61124 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.62■□□□□ 0.41
Cln3Q61124 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cln3Q61124 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cln3Q61124 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.61■□□□□ 0.41
Cln3Q61124 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cln3Q61124 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.6■□□□□ 0.41
Cln3Q61124 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Cln3Q61124 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.6■□□□□ 0.41
Cln3Q61124 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Chchd1-203ENSMUST00000224633 557 ntBASIC17.6■□□□□ 0.41
Cln3Q61124 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.6■□□□□ 0.41
Cln3Q61124 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.6■□□□□ 0.41
Cln3Q61124 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.6■□□□□ 0.41
Cln3Q61124 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.6■□□□□ 0.41
Cln3Q61124 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.6■□□□□ 0.41
Cln3Q61124 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cln3Q61124 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Cln3Q61124 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cln3Q61124 Gm15358-201ENSMUST00000119249 520 ntBASIC17.59■□□□□ 0.41
Cln3Q61124 Gm8344-201ENSMUST00000119813 856 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms