Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.36■□□□□ 0.21
Sdf4Q61112 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sdf4Q61112 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sdf4Q61112 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdf4Q61112 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sdf4Q61112 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Gm33142-201ENSMUST00000193913 867 ntBASIC16.35■□□□□ 0.21
Sdf4Q61112 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sdf4Q61112 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdf4Q61112 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Sdf4Q61112 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.34■□□□□ 0.21
Sdf4Q61112 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.34■□□□□ 0.21
Sdf4Q61112 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.34■□□□□ 0.21
Sdf4Q61112 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sdf4Q61112 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdf4Q61112 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Sdf4Q61112 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Sdf4Q61112 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdf4Q61112 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sdf4Q61112 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdf4Q61112 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdf4Q61112 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdf4Q61112 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.33■□□□□ 0.2
Sdf4Q61112 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Sdf4Q61112 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.33■□□□□ 0.2
Sdf4Q61112 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.33■□□□□ 0.2
Sdf4Q61112 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdf4Q61112 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms