Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Foxd3Q61060 Actl10-202ENSMUST00000226583 1501 ntBASIC14.82□□□□□ -0.04
Foxd3Q61060 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxd3Q61060 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Foxd3Q61060 Gm13186-201ENSMUST00000118031 316 ntBASIC14.82□□□□□ -0.04
Foxd3Q61060 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.82□□□□□ -0.04
Foxd3Q61060 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Foxd3Q61060 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxd3Q61060 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.81□□□□□ -0.04
Foxd3Q61060 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.81□□□□□ -0.04
Foxd3Q61060 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.81□□□□□ -0.04
Foxd3Q61060 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Foxd3Q61060 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxd3Q61060 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Foxd3Q61060 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Foxd3Q61060 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.8□□□□□ -0.04
Foxd3Q61060 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Foxd3Q61060 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Foxd3Q61060 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Foxd3Q61060 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
Foxd3Q61060 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Foxd3Q61060 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxd3Q61060 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Foxd3Q61060 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Foxd3Q61060 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Foxd3Q61060 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.79□□□□□ -0.04
Foxd3Q61060 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.79□□□□□ -0.04
Foxd3Q61060 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxd3Q61060 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxd3Q61060 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms