Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.24■□□□□ 0.03
Ripk1Q60855 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ripk1Q60855 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ripk1Q60855 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ripk1Q60855 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk1Q60855 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ripk1Q60855 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.23■□□□□ 0.03
Ripk1Q60855 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Gm36967-201ENSMUST00000193814 266 ntBASIC15.23■□□□□ 0.03
Ripk1Q60855 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk1Q60855 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ripk1Q60855 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.22■□□□□ 0.03
Ripk1Q60855 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.22■□□□□ 0.03
Ripk1Q60855 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.22■□□□□ 0.03
Ripk1Q60855 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ripk1Q60855 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ripk1Q60855 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ripk1Q60855 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ripk1Q60855 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.21■□□□□ 0.03
Ripk1Q60855 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ripk1Q60855 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ripk1Q60855 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ripk1Q60855 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ripk1Q60855 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ripk1Q60855 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ripk1Q60855 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ripk1Q60855 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Ripk1Q60855 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ripk1Q60855 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.2■□□□□ 0.02
Ripk1Q60855 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ripk1Q60855 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ripk1Q60855 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms