Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Gm37805-201ENSMUST00000192612 1094 ntBASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-1Q5R1I8 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-1Q5R1I8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-1Q5R1I8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms