Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7-2Q5R1I3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Gm43799-201ENSMUST00000201845 579 ntBASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Gm18959-201ENSMUST00000208954 655 ntBASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7-2Q5R1I3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7-2Q5R1I3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7-2Q5R1I3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7-2Q5R1I3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7-2Q5R1I3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav7-2Q5R1I3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7-2Q5R1I3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7-2Q5R1I3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms